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JR-Assembler
An
assembler for the de novo assembly of
large genomes using short sequence reads via jumping extension and read remapping
News
Sep 17, 2014
JR-Assembler v.1.0.4 disables the function of low complexity region removal (due to the improvement of read length) and uses SSPACE 3.0 for scaffolding.
Aug
16, 2013
JR-Assembler is modified to utilize the latest version of the third-party tools.
In the configure file, parameters are renamed and only the default parameter values are kept.
July
18, 2013
JR-Assembler web site is available.
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Publication
Te-Chin Chu, Chen-Hua Lu, Tsunglin Liu, Greg C. Lee, Wen-Hsiung Li, and Arthur Chun-Chieh Shih, “Assembler for
de novo assembly of large genomes,” Proceedings of the National Academy of Science, September 3, 2013 vol. 110 no. 36 E3417-E3424.
(abstract)
(pdf)
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